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(John Arbash Meinel) Fix bug #104257 to handle unknown files in previously empty versioned directories

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* Don't produce encoding error when adding duplicate files.

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(Aaron Bentley)

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* Fix ``InterDirstateTre._iter_changes`` to handle when we come across

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an empty versioned directory, which now has files in it.

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(John Arbash Meinel, #104257)

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* Teach ``common_ancestor`` to shortcut when the tip of one branch is

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inside the ancestry of the other. Saves a lot of graph processing

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(with an ancestry of 16k revisions, ``bzr merge ../already-merged``