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# Copyright (C) 2007 Canonical Ltd
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU General Public License as published by
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# the Free Software Foundation; either version 2 of the License, or
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# (at your option) any later version.
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# This program is distributed in the hope that it will be useful,
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# but WITHOUT ANY WARRANTY; without even the implied warranty of
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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# GNU General Public License for more details.
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# You should have received a copy of the GNU General Public License
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# along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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"""Indexing facilities."""
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'GraphIndexPrefixAdapter',
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from bisect import bisect_right
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from cStringIO import StringIO
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from bzrlib.lazy_import import lazy_import
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lazy_import(globals(), """
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from bzrlib import trace
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from bzrlib.bisect_multi import bisect_multi_bytes
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from bzrlib.trace import mutter
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from bzrlib import debug, errors
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_OPTION_KEY_ELEMENTS = "key_elements="
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_OPTION_NODE_REFS = "node_ref_lists="
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_SIGNATURE = "Bazaar Graph Index 1\n"
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_whitespace_re = re.compile('[\t\n\x0b\x0c\r\x00 ]')
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_newline_null_re = re.compile('[\n\0]')
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class GraphIndexBuilder(object):
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"""A builder that can build a GraphIndex.
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The resulting graph has the structure:
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_SIGNATURE OPTIONS NODES NEWLINE
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_SIGNATURE := 'Bazaar Graph Index 1' NEWLINE
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OPTIONS := 'node_ref_lists=' DIGITS NEWLINE
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NODE := KEY NULL ABSENT? NULL REFERENCES NULL VALUE NEWLINE
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KEY := Not-whitespace-utf8
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REFERENCES := REFERENCE_LIST (TAB REFERENCE_LIST){node_ref_lists - 1}
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REFERENCE_LIST := (REFERENCE (CR REFERENCE)*)?
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REFERENCE := DIGITS ; digits is the byte offset in the index of the
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VALUE := no-newline-no-null-bytes
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def __init__(self, reference_lists=0, key_elements=1):
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"""Create a GraphIndex builder.
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:param reference_lists: The number of node references lists for each
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:param key_elements: The number of bytestrings in each key.
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self.reference_lists = reference_lists
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self._nodes_by_key = {}
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self._key_length = key_elements
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def _check_key(self, key):
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"""Raise BadIndexKey if key is not a valid key for this index."""
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if type(key) != tuple:
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raise errors.BadIndexKey(key)
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if self._key_length != len(key):
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raise errors.BadIndexKey(key)
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if not element or _whitespace_re.search(element) is not None:
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raise errors.BadIndexKey(element)
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def add_node(self, key, value, references=()):
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"""Add a node to the index.
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:param key: The key. keys are non-empty tuples containing
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as many whitespace-free utf8 bytestrings as the key length
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defined for this index.
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:param references: An iterable of iterables of keys. Each is a
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reference to another key.
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:param value: The value to associate with the key. It may be any
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bytes as long as it does not contain \0 or \n.
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if _newline_null_re.search(value) is not None:
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raise errors.BadIndexValue(value)
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if len(references) != self.reference_lists:
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raise errors.BadIndexValue(references)
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for reference_list in references:
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for reference in reference_list:
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self._check_key(reference)
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if reference not in self._nodes:
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self._nodes[reference] = ('a', (), '')
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node_refs.append(tuple(reference_list))
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if key in self._nodes and self._nodes[key][0] == '':
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raise errors.BadIndexDuplicateKey(key, self)
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self._nodes[key] = ('', tuple(node_refs), value)
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if self._key_length > 1:
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key_dict = self._nodes_by_key
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if self.reference_lists:
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key_value = key, value, tuple(node_refs)
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key_value = key, value
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# possibly should do this on-demand, but it seems likely it is
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# For a key of (foo, bar, baz) create
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# _nodes_by_key[foo][bar][baz] = key_value
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for subkey in key[:-1]:
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key_dict = key_dict.setdefault(subkey, {})
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key_dict[key[-1]] = key_value
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lines.append(_OPTION_NODE_REFS + str(self.reference_lists) + '\n')
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lines.append(_OPTION_KEY_ELEMENTS + str(self._key_length) + '\n')
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lines.append(_OPTION_LEN + str(len(self._keys)) + '\n')
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prefix_length = sum(len(x) for x in lines)
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# references are byte offsets. To avoid having to do nasty
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# polynomial work to resolve offsets (references to later in the
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# file cannot be determined until all the inbetween references have
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# been calculated too) we pad the offsets with 0's to make them be
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# of consistent length. Using binary offsets would break the trivial
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# to calculate the width of zero's needed we do three passes:
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# one to gather all the non-reference data and the number of references.
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# one to pad all the data with reference-length and determine entry
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# forward sorted by key. In future we may consider topological sorting,
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# at the cost of table scans for direct lookup, or a second index for
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nodes = sorted(self._nodes.items())
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# if we do not prepass, we don't know how long it will be up front.
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expected_bytes = None
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# we only need to pre-pass if we have reference lists at all.
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if self.reference_lists:
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non_ref_bytes = prefix_length
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# TODO use simple multiplication for the constants in this loop.
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for key, (absent, references, value) in nodes:
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# record the offset known *so far* for this key:
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# the non reference bytes to date, and the total references to
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# date - saves reaccumulating on the second pass
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key_offset_info.append((key, non_ref_bytes, total_references))
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# key is literal, value is literal, there are 3 null's, 1 NL
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# key is variable length tuple, \x00 between elements
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non_ref_bytes += sum(len(element) for element in key)
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if self._key_length > 1:
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non_ref_bytes += self._key_length - 1
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# value is literal bytes, there are 3 null's, 1 NL.
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non_ref_bytes += len(value) + 3 + 1
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# one byte for absent if set.
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elif self.reference_lists:
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# (ref_lists -1) tabs
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non_ref_bytes += self.reference_lists - 1
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# (ref-1 cr's per ref_list)
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for ref_list in references:
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# how many references across the whole file?
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total_references += len(ref_list)
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# accrue reference separators
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non_ref_bytes += len(ref_list) - 1
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# how many digits are needed to represent the total byte count?
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possible_total_bytes = non_ref_bytes + total_references*digits
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while 10 ** digits < possible_total_bytes:
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possible_total_bytes = non_ref_bytes + total_references*digits
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expected_bytes = possible_total_bytes + 1 # terminating newline
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# resolve key addresses.
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for key, non_ref_bytes, total_references in key_offset_info:
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key_addresses[key] = non_ref_bytes + total_references*digits
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format_string = '%%0%sd' % digits
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for key, (absent, references, value) in nodes:
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flattened_references = []
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for ref_list in references:
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for reference in ref_list:
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ref_addresses.append(format_string % key_addresses[reference])
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flattened_references.append('\r'.join(ref_addresses))
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string_key = '\x00'.join(key)
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lines.append("%s\x00%s\x00%s\x00%s\n" % (string_key, absent,
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'\t'.join(flattened_references), value))
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result = StringIO(''.join(lines))
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if expected_bytes and len(result.getvalue()) != expected_bytes:
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raise errors.BzrError('Failed index creation. Internal error:'
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' mismatched output length and expected length: %d %d' %
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(len(result.getvalue()), expected_bytes))
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return StringIO(''.join(lines))
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class GraphIndex(object):
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"""An index for data with embedded graphs.
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The index maps keys to a list of key reference lists, and a value.
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Each node has the same number of key reference lists. Each key reference
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list can be empty or an arbitrary length. The value is an opaque NULL
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terminated string without any newlines. The storage of the index is
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hidden in the interface: keys and key references are always tuples of
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bytestrings, never the internal representation (e.g. dictionary offsets).
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It is presumed that the index will not be mutated - it is static data.
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Successive iter_all_entries calls will read the entire index each time.
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Additionally, iter_entries calls will read the index linearly until the
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desired keys are found. XXX: This must be fixed before the index is
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suitable for production use. :XXX
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def __init__(self, transport, name, size):
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"""Open an index called name on transport.
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:param transport: A bzrlib.transport.Transport.
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:param name: A path to provide to transport API calls.
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:param size: The size of the index in bytes. This is used for bisection
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logic to perform partial index reads. While the size could be
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obtained by statting the file this introduced an additional round
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trip as well as requiring stat'able transports, both of which are
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avoided by having it supplied. If size is None, then bisection
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support will be disabled and accessing the index will just stream
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self._transport = transport
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# Becomes a dict of key:(value, reference-list-byte-locations) used by
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# the bisection interface to store parsed but not resolved keys.
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self._bisect_nodes = None
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# Becomes a dict of key:(value, reference-list-keys) which are ready to
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# be returned directly to callers.
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# a sorted list of slice-addresses for the parsed bytes of the file.
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# e.g. (0,1) would mean that byte 0 is parsed.
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self._parsed_byte_map = []
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# a sorted list of keys matching each slice address for parsed bytes
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# e.g. (None, 'foo@bar') would mean that the first byte contained no
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# key, and the end byte of the slice is the of the data for 'foo@bar'
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self._parsed_key_map = []
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self._key_count = None
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self._keys_by_offset = None
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self._nodes_by_key = None
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def __eq__(self, other):
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"""Equal when self and other were created with the same parameters."""
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type(self) == type(other) and
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self._transport == other._transport and
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self._name == other._name and
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self._size == other._size)
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def __ne__(self, other):
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return not self.__eq__(other)
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def _buffer_all(self):
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"""Buffer all the index data.
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Mutates self._nodes and self.keys_by_offset.
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if 'index' in debug.debug_flags:
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mutter('Reading entire index %s', self._transport.abspath(self._name))
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stream = self._transport.get(self._name)
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self._read_prefix(stream)
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self._expected_elements = 3 + self._key_length
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# raw data keyed by offset
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self._keys_by_offset = {}
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# ready-to-return key:value or key:value, node_ref_lists
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self._nodes_by_key = {}
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lines = stream.read().split('\n')
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_, _, _, trailers = self._parse_lines(lines, pos)
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for key, absent, references, value in self._keys_by_offset.itervalues():
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# resolve references:
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if self.node_ref_lists:
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node_value = (value, self._resolve_references(references))
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self._nodes[key] = node_value
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if self._key_length > 1:
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subkey = list(reversed(key[:-1]))
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key_dict = self._nodes_by_key
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if self.node_ref_lists:
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key_value = key, node_value[0], node_value[1]
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key_value = key, node_value
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# possibly should do this on-demand, but it seems likely it is
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# For a key of (foo, bar, baz) create
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# _nodes_by_key[foo][bar][baz] = key_value
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for subkey in key[:-1]:
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key_dict = key_dict.setdefault(subkey, {})
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key_dict[key[-1]] = key_value
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# cache the keys for quick set intersections
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self._keys = set(self._nodes)
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# there must be one line - the empty trailer line.
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raise errors.BadIndexData(self)
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def iter_all_entries(self):
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"""Iterate over all keys within the index.
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:return: An iterable of (index, key, value) or (index, key, value, reference_lists).
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The former tuple is used when there are no reference lists in the
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index, making the API compatible with simple key:value index types.
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There is no defined order for the result iteration - it will be in
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the most efficient order for the index.
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if 'evil' in debug.debug_flags:
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trace.mutter_callsite(3,
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"iter_all_entries scales with size of history.")
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if self._nodes is None:
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if self.node_ref_lists:
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for key, (value, node_ref_lists) in self._nodes.iteritems():
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yield self, key, value, node_ref_lists
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for key, value in self._nodes.iteritems():
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yield self, key, value
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def _read_prefix(self, stream):
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signature = stream.read(len(self._signature()))
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if not signature == self._signature():
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raise errors.BadIndexFormatSignature(self._name, GraphIndex)
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options_line = stream.readline()
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if not options_line.startswith(_OPTION_NODE_REFS):
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raise errors.BadIndexOptions(self)
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self.node_ref_lists = int(options_line[len(_OPTION_NODE_REFS):-1])
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raise errors.BadIndexOptions(self)
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options_line = stream.readline()
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if not options_line.startswith(_OPTION_KEY_ELEMENTS):
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raise errors.BadIndexOptions(self)
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self._key_length = int(options_line[len(_OPTION_KEY_ELEMENTS):-1])
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raise errors.BadIndexOptions(self)
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options_line = stream.readline()
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if not options_line.startswith(_OPTION_LEN):
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raise errors.BadIndexOptions(self)
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self._key_count = int(options_line[len(_OPTION_LEN):-1])
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raise errors.BadIndexOptions(self)
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def _resolve_references(self, references):
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"""Return the resolved key references for references.
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References are resolved by looking up the location of the key in the
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_keys_by_offset map and substituting the key name, preserving ordering.
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:param references: An iterable of iterables of key locations. e.g.
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:return: A tuple of tuples of keys.
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for ref_list in references:
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node_refs.append(tuple([self._keys_by_offset[ref][0] for ref in ref_list]))
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return tuple(node_refs)
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def _find_index(self, range_map, key):
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"""Helper for the _parsed_*_index calls.
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Given a range map - [(start, end), ...], finds the index of the range
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in the map for key if it is in the map, and if it is not there, the
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immediately preceeding range in the map.
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result = bisect_right(range_map, key) - 1
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if result + 1 < len(range_map):
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# check the border condition, it may be in result + 1
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if range_map[result + 1][0] == key[0]:
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def _parsed_byte_index(self, offset):
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"""Return the index of the entry immediately before offset.
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e.g. if the parsed map has regions 0,10 and 11,12 parsed, meaning that
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there is one unparsed byte (the 11th, addressed as[10]). then:
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asking for 0 will return 0
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asking for 10 will return 0
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asking for 11 will return 1
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asking for 12 will return 1
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return self._find_index(self._parsed_byte_map, key)
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def _parsed_key_index(self, key):
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"""Return the index of the entry immediately before key.
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e.g. if the parsed map has regions (None, 'a') and ('b','c') parsed,
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meaning that keys from None to 'a' inclusive, and 'b' to 'c' inclusive
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have been parsed, then:
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asking for '' will return 0
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asking for 'a' will return 0
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asking for 'b' will return 1
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asking for 'e' will return 1
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search_key = (key, None)
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return self._find_index(self._parsed_key_map, search_key)
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def _is_parsed(self, offset):
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"""Returns True if offset has been parsed."""
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index = self._parsed_byte_index(offset)
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if index == len(self._parsed_byte_map):
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return offset < self._parsed_byte_map[index - 1][1]
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start, end = self._parsed_byte_map[index]
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return offset >= start and offset < end
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def _iter_entries_from_total_buffer(self, keys):
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"""Iterate over keys when the entire index is parsed."""
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keys = keys.intersection(self._keys)
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if self.node_ref_lists:
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value, node_refs = self._nodes[key]
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yield self, key, value, node_refs
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yield self, key, self._nodes[key]
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def iter_entries(self, keys):
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"""Iterate over keys within the index.
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:param keys: An iterable providing the keys to be retrieved.
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:return: An iterable as per iter_all_entries, but restricted to the
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keys supplied. No additional keys will be returned, and every
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key supplied that is in the index will be returned.
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# PERFORMANCE TODO: parse and bisect all remaining data at some
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# threshold of total-index processing/get calling layers that expect to
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# read the entire index to use the iter_all_entries method instead.
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if self._size is None and self._nodes is None:
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if self._nodes is not None:
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return self._iter_entries_from_total_buffer(keys)
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return (result[1] for result in bisect_multi_bytes(
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self._lookup_keys_via_location, self._size, keys))
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def iter_entries_prefix(self, keys):
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"""Iterate over keys within the index using prefix matching.
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Prefix matching is applied within the tuple of a key, not to within
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the bytestring of each key element. e.g. if you have the keys ('foo',
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'bar'), ('foobar', 'gam') and do a prefix search for ('foo', None) then
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only the former key is returned.
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WARNING: Note that this method currently causes a full index parse
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unconditionally (which is reasonably appropriate as it is a means for
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thunking many small indices into one larger one and still supplies
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iter_all_entries at the thunk layer).
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:param keys: An iterable providing the key prefixes to be retrieved.
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Each key prefix takes the form of a tuple the length of a key, but
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with the last N elements 'None' rather than a regular bytestring.
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The first element cannot be 'None'.
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:return: An iterable as per iter_all_entries, but restricted to the
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keys with a matching prefix to those supplied. No additional keys
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will be returned, and every match that is in the index will be
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# load data - also finds key lengths
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if self._nodes is None:
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if self._key_length == 1:
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raise errors.BadIndexKey(key)
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if len(key) != self._key_length:
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raise errors.BadIndexKey(key)
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if self.node_ref_lists:
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value, node_refs = self._nodes[key]
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yield self, key, value, node_refs
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yield self, key, self._nodes[key]
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raise errors.BadIndexKey(key)
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if len(key) != self._key_length:
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raise errors.BadIndexKey(key)
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# find what it refers to:
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key_dict = self._nodes_by_key
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# find the subdict whose contents should be returned.
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while len(elements) and elements[0] is not None:
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key_dict = key_dict[elements[0]]
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# a non-existant lookup.
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key_dict = dicts.pop(-1)
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# can't be empty or would not exist
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item, value = key_dict.iteritems().next()
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if type(value) == dict:
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dicts.extend(key_dict.itervalues())
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for value in key_dict.itervalues():
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# each value is the key:value:node refs tuple
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yield (self, ) + value
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# the last thing looked up was a terminal element
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yield (self, ) + key_dict
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"""Return an estimate of the number of keys in this index.
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For GraphIndex the estimate is exact.
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if self._key_count is None:
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# really this should just read the prefix
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return self._key_count
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def _lookup_keys_via_location(self, location_keys):
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"""Public interface for implementing bisection.
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If _buffer_all has been called, then all the data for the index is in
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memory, and this method should not be called, as it uses a separate
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cache because it cannot pre-resolve all indices, which buffer_all does
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:param location_keys: A list of location(byte offset), key tuples.
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:return: A list of (location_key, result) tuples as expected by
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bzrlib.bisect_multi.bisect_multi_bytes.
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# Possible improvements:
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# - only bisect lookup each key once
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# - sort the keys first, and use that to reduce the bisection window
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# this progresses in three parts:
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# attempt to answer the question from the now in memory data.
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# build the readv request
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# for each location, ask for 800 bytes - much more than rows we've seen
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for location, key in location_keys:
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# can we answer from cache?
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if self._bisect_nodes and key in self._bisect_nodes:
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# We have the key parsed.
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index = self._parsed_key_index(key)
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if (len(self._parsed_key_map) and
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self._parsed_key_map[index][0] <= key and
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(self._parsed_key_map[index][1] >= key or
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# end of the file has been parsed
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self._parsed_byte_map[index][1] == self._size)):
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# the key has been parsed, so no lookup is needed even if its
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# - if we have examined this part of the file already - yes
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index = self._parsed_byte_index(location)
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if (len(self._parsed_byte_map) and
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self._parsed_byte_map[index][0] <= location and
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self._parsed_byte_map[index][1] > location):
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# the byte region has been parsed, so no read is needed.
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if location + length > self._size:
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length = self._size - location
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# todo, trim out parsed locations.
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readv_ranges.append((location, length))
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# read the header if needed
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if self._bisect_nodes is None:
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readv_ranges.append((0, 200))
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self._read_and_parse(readv_ranges)
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# - figure out <, >, missing, present
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# - result present references so we can return them.
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# keys that we cannot answer until we resolve references
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pending_references = []
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pending_locations = set()
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for location, key in location_keys:
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# can we answer from cache?
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if key in self._bisect_nodes:
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# the key has been parsed, so no lookup is needed
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if self.node_ref_lists:
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# the references may not have been all parsed.
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value, refs = self._bisect_nodes[key]
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wanted_locations = []
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for ref_list in refs:
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if ref not in self._keys_by_offset:
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wanted_locations.append(ref)
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pending_locations.update(wanted_locations)
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pending_references.append((location, key))
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result.append(((location, key), (self, key,
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value, self._resolve_references(refs))))
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result.append(((location, key),
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(self, key, self._bisect_nodes[key])))
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# has the region the key should be in, been parsed?
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index = self._parsed_key_index(key)
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if (self._parsed_key_map[index][0] <= key and
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(self._parsed_key_map[index][1] >= key or
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# end of the file has been parsed
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self._parsed_byte_map[index][1] == self._size)):
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result.append(((location, key), False))
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# no, is the key above or below the probed location:
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# get the range of the probed & parsed location
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index = self._parsed_byte_index(location)
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# if the key is below the start of the range, its below
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if key < self._parsed_key_map[index][0]:
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result.append(((location, key), direction))
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# lookup data to resolve references
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for location in pending_locations:
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if location + length > self._size:
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length = self._size - location
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# TODO: trim out parsed locations (e.g. if the 800 is into the
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# parsed region trim it, and dont use the adjust_for_latency
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readv_ranges.append((location, length))
675
self._read_and_parse(readv_ranges)
676
for location, key in pending_references:
677
# answer key references we had to look-up-late.
678
index = self._parsed_key_index(key)
679
value, refs = self._bisect_nodes[key]
680
result.append(((location, key), (self, key,
681
value, self._resolve_references(refs))))
684
def _parse_header_from_bytes(self, bytes):
685
"""Parse the header from a region of bytes.
687
:param bytes: The data to parse.
688
:return: An offset, data tuple such as readv yields, for the unparsed
689
data. (which may length 0).
691
signature = bytes[0:len(self._signature())]
692
if not signature == self._signature():
693
raise errors.BadIndexFormatSignature(self._name, GraphIndex)
694
lines = bytes[len(self._signature()):].splitlines()
695
options_line = lines[0]
696
if not options_line.startswith(_OPTION_NODE_REFS):
697
raise errors.BadIndexOptions(self)
699
self.node_ref_lists = int(options_line[len(_OPTION_NODE_REFS):])
701
raise errors.BadIndexOptions(self)
702
options_line = lines[1]
703
if not options_line.startswith(_OPTION_KEY_ELEMENTS):
704
raise errors.BadIndexOptions(self)
706
self._key_length = int(options_line[len(_OPTION_KEY_ELEMENTS):])
708
raise errors.BadIndexOptions(self)
709
options_line = lines[2]
710
if not options_line.startswith(_OPTION_LEN):
711
raise errors.BadIndexOptions(self)
713
self._key_count = int(options_line[len(_OPTION_LEN):])
715
raise errors.BadIndexOptions(self)
716
# calculate the bytes we have processed
717
header_end = (len(signature) + len(lines[0]) + len(lines[1]) +
719
self._parsed_bytes(0, None, header_end, None)
720
# setup parsing state
721
self._expected_elements = 3 + self._key_length
722
# raw data keyed by offset
723
self._keys_by_offset = {}
724
# keys with the value and node references
725
self._bisect_nodes = {}
726
return header_end, bytes[header_end:]
728
def _parse_region(self, offset, data):
729
"""Parse node data returned from a readv operation.
731
:param offset: The byte offset the data starts at.
732
:param data: The data to parse.
736
end = offset + len(data)
739
# Trivial test - if the current index's end is within the
740
# low-matching parsed range, we're done.
741
index = self._parsed_byte_index(high_parsed)
742
if end < self._parsed_byte_map[index][1]:
744
# print "[%d:%d]" % (offset, end), \
745
# self._parsed_byte_map[index:index + 2]
746
high_parsed, last_segment = self._parse_segment(
747
offset, data, end, index)
751
def _parse_segment(self, offset, data, end, index):
752
"""Parse one segment of data.
754
:param offset: Where 'data' begins in the file.
755
:param data: Some data to parse a segment of.
756
:param end: Where data ends
757
:param index: The current index into the parsed bytes map.
758
:return: True if the parsed segment is the last possible one in the
760
:return: high_parsed_byte, last_segment.
761
high_parsed_byte is the location of the highest parsed byte in this
762
segment, last_segment is True if the parsed segment is the last
763
possible one in the data block.
765
# default is to use all data
767
# accomodate overlap with data before this.
768
if offset < self._parsed_byte_map[index][1]:
769
# overlaps the lower parsed region
770
# skip the parsed data
771
trim_start = self._parsed_byte_map[index][1] - offset
772
# don't trim the start for \n
773
start_adjacent = True
774
elif offset == self._parsed_byte_map[index][1]:
775
# abuts the lower parsed region
778
# do not trim anything
779
start_adjacent = True
781
# does not overlap the lower parsed region
784
# but trim the leading \n
785
start_adjacent = False
786
if end == self._size:
787
# lines up to the end of all data:
790
# do not strip to the last \n
793
elif index + 1 == len(self._parsed_byte_map):
794
# at the end of the parsed data
797
# but strip to the last \n
800
elif end == self._parsed_byte_map[index + 1][0]:
801
# buts up against the next parsed region
804
# do not strip to the last \n
807
elif end > self._parsed_byte_map[index + 1][0]:
808
# overlaps into the next parsed region
809
# only consider the unparsed data
810
trim_end = self._parsed_byte_map[index + 1][0] - offset
811
# do not strip to the last \n as we know its an entire record
813
last_segment = end < self._parsed_byte_map[index + 1][1]
815
# does not overlap into the next region
818
# but strip to the last \n
821
# now find bytes to discard if needed
822
if not start_adjacent:
823
# work around python bug in rfind
824
if trim_start is None:
825
trim_start = data.find('\n') + 1
827
trim_start = data.find('\n', trim_start) + 1
828
assert trim_start != 0, 'no \n was present'
829
# print 'removing start', offset, trim_start, repr(data[:trim_start])
831
# work around python bug in rfind
833
trim_end = data.rfind('\n') + 1
835
trim_end = data.rfind('\n', None, trim_end) + 1
836
assert trim_end != 0, 'no \n was present'
837
# print 'removing end', offset, trim_end, repr(data[trim_end:])
838
# adjust offset and data to the parseable data.
839
trimmed_data = data[trim_start:trim_end]
840
assert trimmed_data, 'read unneeded data [%d:%d] from [%d:%d]' % (
841
trim_start, trim_end, offset, offset + len(data))
844
# print "parsing", repr(trimmed_data)
845
# splitlines mangles the \r delimiters.. don't use it.
846
lines = trimmed_data.split('\n')
849
first_key, last_key, nodes, _ = self._parse_lines(lines, pos)
850
for key, value in nodes:
851
self._bisect_nodes[key] = value
852
self._parsed_bytes(offset, first_key,
853
offset + len(trimmed_data), last_key)
854
return offset + len(trimmed_data), last_segment
856
def _parse_lines(self, lines, pos):
865
assert self._size == pos + 1, "%s %s" % (self._size, pos)
868
elements = line.split('\0')
869
if len(elements) != self._expected_elements:
870
raise errors.BadIndexData(self)
872
key = tuple(elements[:self._key_length])
873
if first_key is None:
875
absent, references, value = elements[-3:]
877
for ref_string in references.split('\t'):
878
ref_lists.append(tuple([
879
int(ref) for ref in ref_string.split('\r') if ref
881
ref_lists = tuple(ref_lists)
882
self._keys_by_offset[pos] = (key, absent, ref_lists, value)
883
pos += len(line) + 1 # +1 for the \n
886
if self.node_ref_lists:
887
node_value = (value, ref_lists)
890
nodes.append((key, node_value))
891
# print "parsed ", key
892
return first_key, key, nodes, trailers
894
def _parsed_bytes(self, start, start_key, end, end_key):
895
"""Mark the bytes from start to end as parsed.
897
Calling self._parsed_bytes(1,2) will mark one byte (the one at offset
900
:param start: The start of the parsed region.
901
:param end: The end of the parsed region.
903
index = self._parsed_byte_index(start)
904
new_value = (start, end)
905
new_key = (start_key, end_key)
907
# first range parsed is always the beginning.
908
self._parsed_byte_map.insert(index, new_value)
909
self._parsed_key_map.insert(index, new_key)
913
# extend lower region
914
# extend higher region
915
# combine two regions
916
if (index + 1 < len(self._parsed_byte_map) and
917
self._parsed_byte_map[index][1] == start and
918
self._parsed_byte_map[index + 1][0] == end):
919
# combine two regions
920
self._parsed_byte_map[index] = (self._parsed_byte_map[index][0],
921
self._parsed_byte_map[index + 1][1])
922
self._parsed_key_map[index] = (self._parsed_key_map[index][0],
923
self._parsed_key_map[index + 1][1])
924
del self._parsed_byte_map[index + 1]
925
del self._parsed_key_map[index + 1]
926
elif self._parsed_byte_map[index][1] == start:
927
# extend the lower entry
928
self._parsed_byte_map[index] = (
929
self._parsed_byte_map[index][0], end)
930
self._parsed_key_map[index] = (
931
self._parsed_key_map[index][0], end_key)
932
elif (index + 1 < len(self._parsed_byte_map) and
933
self._parsed_byte_map[index + 1][0] == end):
934
# extend the higher entry
935
self._parsed_byte_map[index + 1] = (
936
start, self._parsed_byte_map[index + 1][1])
937
self._parsed_key_map[index + 1] = (
938
start_key, self._parsed_key_map[index + 1][1])
941
self._parsed_byte_map.insert(index + 1, new_value)
942
self._parsed_key_map.insert(index + 1, new_key)
944
def _read_and_parse(self, readv_ranges):
945
"""Read the the ranges and parse the resulting data.
947
:param readv_ranges: A prepared readv range list.
950
readv_data = self._transport.readv(self._name, readv_ranges, True,
953
for offset, data in readv_data:
954
if self._bisect_nodes is None:
955
# this must be the start
957
offset, data = self._parse_header_from_bytes(data)
958
# print readv_ranges, "[%d:%d]" % (offset, offset + len(data))
959
self._parse_region(offset, data)
961
def _signature(self):
962
"""The file signature for this index type."""
966
"""Validate that everything in the index can be accessed."""
967
# iter_all validates completely at the moment, so just do that.
968
for node in self.iter_all_entries():
972
class CombinedGraphIndex(object):
973
"""A GraphIndex made up from smaller GraphIndices.
975
The backing indices must implement GraphIndex, and are presumed to be
978
Queries against the combined index will be made against the first index,
979
and then the second and so on. The order of index's can thus influence
980
performance significantly. For example, if one index is on local disk and a
981
second on a remote server, the local disk index should be before the other
985
def __init__(self, indices):
986
"""Create a CombinedGraphIndex backed by indices.
988
:param indices: An ordered list of indices to query for data.
990
self._indices = indices
994
self.__class__.__name__,
995
', '.join(map(repr, self._indices)))
997
def insert_index(self, pos, index):
998
"""Insert a new index in the list of indices to query.
1000
:param pos: The position to insert the index.
1001
:param index: The index to insert.
1003
self._indices.insert(pos, index)
1005
def iter_all_entries(self):
1006
"""Iterate over all keys within the index
1008
Duplicate keys across child indices are presumed to have the same
1009
value and are only reported once.
1011
:return: An iterable of (index, key, reference_lists, value).
1012
There is no defined order for the result iteration - it will be in
1013
the most efficient order for the index.
1016
for index in self._indices:
1017
for node in index.iter_all_entries():
1018
if node[1] not in seen_keys:
1020
seen_keys.add(node[1])
1022
def iter_entries(self, keys):
1023
"""Iterate over keys within the index.
1025
Duplicate keys across child indices are presumed to have the same
1026
value and are only reported once.
1028
:param keys: An iterable providing the keys to be retrieved.
1029
:return: An iterable of (index, key, reference_lists, value). There is no
1030
defined order for the result iteration - it will be in the most
1031
efficient order for the index.
1034
for index in self._indices:
1037
for node in index.iter_entries(keys):
1038
keys.remove(node[1])
1041
def iter_entries_prefix(self, keys):
1042
"""Iterate over keys within the index using prefix matching.
1044
Duplicate keys across child indices are presumed to have the same
1045
value and are only reported once.
1047
Prefix matching is applied within the tuple of a key, not to within
1048
the bytestring of each key element. e.g. if you have the keys ('foo',
1049
'bar'), ('foobar', 'gam') and do a prefix search for ('foo', None) then
1050
only the former key is returned.
1052
:param keys: An iterable providing the key prefixes to be retrieved.
1053
Each key prefix takes the form of a tuple the length of a key, but
1054
with the last N elements 'None' rather than a regular bytestring.
1055
The first element cannot be 'None'.
1056
:return: An iterable as per iter_all_entries, but restricted to the
1057
keys with a matching prefix to those supplied. No additional keys
1058
will be returned, and every match that is in the index will be
1065
for index in self._indices:
1066
for node in index.iter_entries_prefix(keys):
1067
if node[1] in seen_keys:
1069
seen_keys.add(node[1])
1072
def key_count(self):
1073
"""Return an estimate of the number of keys in this index.
1075
For CombinedGraphIndex this is approximated by the sum of the keys of
1076
the child indices. As child indices may have duplicate keys this can
1077
have a maximum error of the number of child indices * largest number of
1080
return sum((index.key_count() for index in self._indices), 0)
1083
"""Validate that everything in the index can be accessed."""
1084
for index in self._indices:
1088
class InMemoryGraphIndex(GraphIndexBuilder):
1089
"""A GraphIndex which operates entirely out of memory and is mutable.
1091
This is designed to allow the accumulation of GraphIndex entries during a
1092
single write operation, where the accumulated entries need to be immediately
1093
available - for example via a CombinedGraphIndex.
1096
def add_nodes(self, nodes):
1097
"""Add nodes to the index.
1099
:param nodes: An iterable of (key, node_refs, value) entries to add.
1101
if self.reference_lists:
1102
for (key, value, node_refs) in nodes:
1103
self.add_node(key, value, node_refs)
1105
for (key, value) in nodes:
1106
self.add_node(key, value)
1108
def iter_all_entries(self):
1109
"""Iterate over all keys within the index
1111
:return: An iterable of (index, key, reference_lists, value). There is no
1112
defined order for the result iteration - it will be in the most
1113
efficient order for the index (in this case dictionary hash order).
1115
if 'evil' in debug.debug_flags:
1116
trace.mutter_callsite(3,
1117
"iter_all_entries scales with size of history.")
1118
if self.reference_lists:
1119
for key, (absent, references, value) in self._nodes.iteritems():
1121
yield self, key, value, references
1123
for key, (absent, references, value) in self._nodes.iteritems():
1125
yield self, key, value
1127
def iter_entries(self, keys):
1128
"""Iterate over keys within the index.
1130
:param keys: An iterable providing the keys to be retrieved.
1131
:return: An iterable of (index, key, reference_lists, value). There is no
1132
defined order for the result iteration - it will be in the most
1133
efficient order for the index (keys iteration order in this case).
1136
if self.reference_lists:
1137
for key in keys.intersection(self._keys):
1138
node = self._nodes[key]
1140
yield self, key, node[2], node[1]
1142
for key in keys.intersection(self._keys):
1143
node = self._nodes[key]
1145
yield self, key, node[2]
1147
def iter_entries_prefix(self, keys):
1148
"""Iterate over keys within the index using prefix matching.
1150
Prefix matching is applied within the tuple of a key, not to within
1151
the bytestring of each key element. e.g. if you have the keys ('foo',
1152
'bar'), ('foobar', 'gam') and do a prefix search for ('foo', None) then
1153
only the former key is returned.
1155
:param keys: An iterable providing the key prefixes to be retrieved.
1156
Each key prefix takes the form of a tuple the length of a key, but
1157
with the last N elements 'None' rather than a regular bytestring.
1158
The first element cannot be 'None'.
1159
:return: An iterable as per iter_all_entries, but restricted to the
1160
keys with a matching prefix to those supplied. No additional keys
1161
will be returned, and every match that is in the index will be
1164
# XXX: To much duplication with the GraphIndex class; consider finding
1165
# a good place to pull out the actual common logic.
1169
if self._key_length == 1:
1173
raise errors.BadIndexKey(key)
1174
if len(key) != self._key_length:
1175
raise errors.BadIndexKey(key)
1176
node = self._nodes[key]
1179
if self.reference_lists:
1180
yield self, key, node[2], node[1]
1182
yield self, key, node[2]
1187
raise errors.BadIndexKey(key)
1188
if len(key) != self._key_length:
1189
raise errors.BadIndexKey(key)
1190
# find what it refers to:
1191
key_dict = self._nodes_by_key
1192
elements = list(key)
1193
# find the subdict to return
1195
while len(elements) and elements[0] is not None:
1196
key_dict = key_dict[elements[0]]
1199
# a non-existant lookup.
1204
key_dict = dicts.pop(-1)
1205
# can't be empty or would not exist
1206
item, value = key_dict.iteritems().next()
1207
if type(value) == dict:
1209
dicts.extend(key_dict.itervalues())
1212
for value in key_dict.itervalues():
1213
yield (self, ) + value
1215
yield (self, ) + key_dict
1217
def key_count(self):
1218
"""Return an estimate of the number of keys in this index.
1220
For InMemoryGraphIndex the estimate is exact.
1222
return len(self._keys)
1225
"""In memory index's have no known corruption at the moment."""
1228
class GraphIndexPrefixAdapter(object):
1229
"""An adapter between GraphIndex with different key lengths.
1231
Queries against this will emit queries against the adapted Graph with the
1232
prefix added, queries for all items use iter_entries_prefix. The returned
1233
nodes will have their keys and node references adjusted to remove the
1234
prefix. Finally, an add_nodes_callback can be supplied - when called the
1235
nodes and references being added will have prefix prepended.
1238
def __init__(self, adapted, prefix, missing_key_length,
1239
add_nodes_callback=None):
1240
"""Construct an adapter against adapted with prefix."""
1241
self.adapted = adapted
1242
self.prefix_key = prefix + (None,)*missing_key_length
1243
self.prefix = prefix
1244
self.prefix_len = len(prefix)
1245
self.add_nodes_callback = add_nodes_callback
1247
def add_nodes(self, nodes):
1248
"""Add nodes to the index.
1250
:param nodes: An iterable of (key, node_refs, value) entries to add.
1252
# save nodes in case its an iterator
1253
nodes = tuple(nodes)
1254
translated_nodes = []
1256
# Add prefix_key to each reference node_refs is a tuple of tuples,
1257
# so split it apart, and add prefix_key to the internal reference
1258
for (key, value, node_refs) in nodes:
1259
adjusted_references = (
1260
tuple(tuple(self.prefix + ref_node for ref_node in ref_list)
1261
for ref_list in node_refs))
1262
translated_nodes.append((self.prefix + key, value,
1263
adjusted_references))
1265
# XXX: TODO add an explicit interface for getting the reference list
1266
# status, to handle this bit of user-friendliness in the API more
1268
for (key, value) in nodes:
1269
translated_nodes.append((self.prefix + key, value))
1270
self.add_nodes_callback(translated_nodes)
1272
def add_node(self, key, value, references=()):
1273
"""Add a node to the index.
1275
:param key: The key. keys are non-empty tuples containing
1276
as many whitespace-free utf8 bytestrings as the key length
1277
defined for this index.
1278
:param references: An iterable of iterables of keys. Each is a
1279
reference to another key.
1280
:param value: The value to associate with the key. It may be any
1281
bytes as long as it does not contain \0 or \n.
1283
self.add_nodes(((key, value, references), ))
1285
def _strip_prefix(self, an_iter):
1286
"""Strip prefix data from nodes and return it."""
1287
for node in an_iter:
1289
if node[1][:self.prefix_len] != self.prefix:
1290
raise errors.BadIndexData(self)
1291
for ref_list in node[3]:
1292
for ref_node in ref_list:
1293
if ref_node[:self.prefix_len] != self.prefix:
1294
raise errors.BadIndexData(self)
1295
yield node[0], node[1][self.prefix_len:], node[2], (
1296
tuple(tuple(ref_node[self.prefix_len:] for ref_node in ref_list)
1297
for ref_list in node[3]))
1299
def iter_all_entries(self):
1300
"""Iterate over all keys within the index
1302
iter_all_entries is implemented against the adapted index using
1303
iter_entries_prefix.
1305
:return: An iterable of (index, key, reference_lists, value). There is no
1306
defined order for the result iteration - it will be in the most
1307
efficient order for the index (in this case dictionary hash order).
1309
return self._strip_prefix(self.adapted.iter_entries_prefix([self.prefix_key]))
1311
def iter_entries(self, keys):
1312
"""Iterate over keys within the index.
1314
:param keys: An iterable providing the keys to be retrieved.
1315
:return: An iterable of (key, reference_lists, value). There is no
1316
defined order for the result iteration - it will be in the most
1317
efficient order for the index (keys iteration order in this case).
1319
return self._strip_prefix(self.adapted.iter_entries(
1320
self.prefix + key for key in keys))
1322
def iter_entries_prefix(self, keys):
1323
"""Iterate over keys within the index using prefix matching.
1325
Prefix matching is applied within the tuple of a key, not to within
1326
the bytestring of each key element. e.g. if you have the keys ('foo',
1327
'bar'), ('foobar', 'gam') and do a prefix search for ('foo', None) then
1328
only the former key is returned.
1330
:param keys: An iterable providing the key prefixes to be retrieved.
1331
Each key prefix takes the form of a tuple the length of a key, but
1332
with the last N elements 'None' rather than a regular bytestring.
1333
The first element cannot be 'None'.
1334
:return: An iterable as per iter_all_entries, but restricted to the
1335
keys with a matching prefix to those supplied. No additional keys
1336
will be returned, and every match that is in the index will be
1339
return self._strip_prefix(self.adapted.iter_entries_prefix(
1340
self.prefix + key for key in keys))
1342
def key_count(self):
1343
"""Return an estimate of the number of keys in this index.
1345
For GraphIndexPrefixAdapter this is relatively expensive - key
1346
iteration with the prefix is done.
1348
return len(list(self.iter_all_entries()))
1351
"""Call the adapted's validate."""
1352
self.adapted.validate()
added
removed
bzrlib/index.py
