4763.2.4
by John Arbash Meinel
merge bzr.2.1 in preparation for NEWS entry. |
1 |
# Copyright (C) 2008, 2009, 2010 Canonical Ltd
|
3735.31.2
by John Arbash Meinel
Cleanup trailing whitespace, get test_source to pass by removing asserts. |
2 |
#
|
0.18.13
by John Arbash Meinel
Copy the EquivalenceTable code into pyrex and get it under test. |
3 |
# This program is free software; you can redistribute it and/or modify
|
3735.36.4
by John Arbash Meinel
Fix the GPL and copyright statements in the pyrex files |
4 |
# it under the terms of the GNU General Public License as published by
|
5 |
# the Free Software Foundation; either version 2 of the License, or
|
|
6 |
# (at your option) any later version.
|
|
3735.31.2
by John Arbash Meinel
Cleanup trailing whitespace, get test_source to pass by removing asserts. |
7 |
#
|
0.18.13
by John Arbash Meinel
Copy the EquivalenceTable code into pyrex and get it under test. |
8 |
# This program is distributed in the hope that it will be useful,
|
9 |
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
10 |
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
11 |
# GNU General Public License for more details.
|
|
3735.31.2
by John Arbash Meinel
Cleanup trailing whitespace, get test_source to pass by removing asserts. |
12 |
#
|
0.18.13
by John Arbash Meinel
Copy the EquivalenceTable code into pyrex and get it under test. |
13 |
# You should have received a copy of the GNU General Public License
|
14 |
# along with this program; if not, write to the Free Software
|
|
3735.36.4
by John Arbash Meinel
Fix the GPL and copyright statements in the pyrex files |
15 |
# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
|
0.18.13
by John Arbash Meinel
Copy the EquivalenceTable code into pyrex and get it under test. |
16 |
|
17 |
"""Compiled extensions for doing compression."""
|
|
18 |
||
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
19 |
#python2.4 support
|
20 |
cdef extern from "python-compat.h": |
|
4265.1.3
by John Arbash Meinel
restore the old Py_ssize_t import in the pyrex files. |
21 |
pass
|
22 |
||
23 |
||
24 |
cdef extern from "Python.h": |
|
5361.2.5
by John Arbash Meinel
Pyrex doesn't allow sizeof(class), so we have to unroll it manually. |
25 |
ctypedef struct PyObject: |
26 |
pass
|
|
4265.1.1
by John Arbash Meinel
Merge the a couple rev older brisbane-core into bzr.dev, most things are resolve in favor of bzr.dev |
27 |
ctypedef int Py_ssize_t # Required for older pyrex versions |
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
28 |
int PyString_CheckExact(object) |
29 |
char * PyString_AS_STRING(object) |
|
30 |
Py_ssize_t PyString_GET_SIZE(object) |
|
31 |
object PyString_FromStringAndSize(char *, Py_ssize_t) |
|
32 |
||
33 |
||
0.18.14
by John Arbash Meinel
A bit more work, not really usable yet. |
34 |
cdef extern from *: |
35 |
ctypedef unsigned long size_t |
|
4788.2.2
by John Arbash Meinel
Stop holding the gil while extracting data. |
36 |
void * malloc(size_t) nogil |
37 |
void * realloc(void *, size_t) nogil |
|
38 |
void free(void *) nogil |
|
39 |
void memcpy(void *, void *, size_t) nogil |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
40 |
|
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
41 |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
42 |
cdef extern from "delta.h": |
0.23.42
by John Arbash Meinel
Change the code around again. |
43 |
struct source_info: |
44 |
void *buf |
|
45 |
unsigned long size |
|
46 |
unsigned long agg_offset |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
47 |
struct delta_index: |
0.23.45
by John Arbash Meinel
Add a function that updates the index for delta bytes. |
48 |
pass
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
49 |
delta_index * create_delta_index(source_info *src, delta_index *old) nogil |
0.23.45
by John Arbash Meinel
Add a function that updates the index for delta bytes. |
50 |
delta_index * create_delta_index_from_delta(source_info *delta, |
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
51 |
delta_index *old) nogil |
52 |
void free_delta_index(delta_index *index) nogil |
|
0.23.44
by John Arbash Meinel
Remove the multi-index handling now that we have index combining instead. |
53 |
void *create_delta(delta_index *indexes, |
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
54 |
void *buf, unsigned long bufsize, |
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
55 |
unsigned long *delta_size, unsigned long max_delta_size) nogil |
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
56 |
unsigned long get_delta_hdr_size(unsigned char **datap, |
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
57 |
unsigned char *top) nogil |
5361.2.3
by John Arbash Meinel
Add a __sizeof__ member for DeltaIndex. |
58 |
unsigned long sizeof_delta_index(delta_index *index) |
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
59 |
Py_ssize_t DELTA_SIZE_MIN |
0.18.14
by John Arbash Meinel
A bit more work, not really usable yet. |
60 |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
61 |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
62 |
cdef void *safe_malloc(size_t count) except NULL: |
63 |
cdef void *result |
|
64 |
result = malloc(count) |
|
65 |
if result == NULL: |
|
66 |
raise MemoryError('Failed to allocate %d bytes of memory' % (count,)) |
|
67 |
return result |
|
68 |
||
69 |
||
70 |
cdef void *safe_realloc(void * old, size_t count) except NULL: |
|
71 |
cdef void *result |
|
72 |
result = realloc(old, count) |
|
73 |
if result == NULL: |
|
74 |
raise MemoryError('Failed to reallocate to %d bytes of memory' |
|
75 |
% (count,)) |
|
76 |
return result |
|
77 |
||
78 |
||
79 |
cdef int safe_free(void **val) except -1: |
|
80 |
assert val != NULL |
|
81 |
if val[0] != NULL: |
|
82 |
free(val[0]) |
|
83 |
val[0] = NULL |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
84 |
|
0.23.17
by John Arbash Meinel
Create a wrapper function, so that lsprof will properly attribute time spent. |
85 |
def make_delta_index(source): |
86 |
return DeltaIndex(source) |
|
87 |
||
88 |
||
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
89 |
cdef class DeltaIndex: |
90 |
||
0.23.40
by John Arbash Meinel
Add a comment why we aren't using the list type for _sources |
91 |
# We need Pyrex 0.9.8+ to understand a 'list' definition, and this object
|
92 |
# isn't performance critical
|
|
93 |
# cdef readonly list _sources
|
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
94 |
cdef readonly object _sources |
0.23.42
by John Arbash Meinel
Change the code around again. |
95 |
cdef source_info *_source_infos |
0.23.43
by John Arbash Meinel
Change the internals to allow delta indexes to be expanded with new source data. |
96 |
cdef delta_index *_index |
5361.2.5
by John Arbash Meinel
Pyrex doesn't allow sizeof(class), so we have to unroll it manually. |
97 |
cdef public unsigned long _source_offset |
0.23.42
by John Arbash Meinel
Change the code around again. |
98 |
cdef readonly unsigned int _max_num_sources |
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
99 |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
100 |
def __init__(self, source=None): |
101 |
self._sources = [] |
|
0.23.43
by John Arbash Meinel
Change the internals to allow delta indexes to be expanded with new source data. |
102 |
self._index = NULL |
0.23.53
by John Arbash Meinel
Remove the temporary adjustment for handling multiple formats of labels. |
103 |
self._max_num_sources = 65000 |
0.23.42
by John Arbash Meinel
Change the code around again. |
104 |
self._source_infos = <source_info *>safe_malloc(sizeof(source_info) |
105 |
* self._max_num_sources) |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
106 |
self._source_offset = 0 |
107 |
||
108 |
if source is not None: |
|
0.23.26
by John Arbash Meinel
We now start to make use of the ability to extend the delta index |
109 |
self.add_source(source, 0) |
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
110 |
|
5361.2.3
by John Arbash Meinel
Add a __sizeof__ member for DeltaIndex. |
111 |
def __sizeof__(self): |
112 |
# We want to track the _source_infos allocations, but the referenced
|
|
113 |
# void* are actually tracked in _sources itself.
|
|
5361.2.5
by John Arbash Meinel
Pyrex doesn't allow sizeof(class), so we have to unroll it manually. |
114 |
# XXX: Cython is capable of doing sizeof(class) and returning the size
|
115 |
# of the underlying struct. Pyrex (<= 0.9.9) refuses, so we need
|
|
116 |
# to do it manually. *sigh* Note that we might get it wrong
|
|
117 |
# because of alignment issues.
|
|
118 |
cdef Py_ssize_t size |
|
119 |
# PyObject start, vtable *, 3 object pointers, 2 C ints
|
|
120 |
size = ((sizeof(PyObject) + sizeof(void*) + 3*sizeof(PyObject*) |
|
121 |
+ sizeof(unsigned long) |
|
122 |
+ sizeof(unsigned int)) |
|
123 |
+ (sizeof(source_info) * self._max_num_sources) |
|
124 |
+ sizeof_delta_index(self._index)) |
|
125 |
return size |
|
5361.2.3
by John Arbash Meinel
Add a __sizeof__ member for DeltaIndex. |
126 |
|
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
127 |
def __repr__(self): |
128 |
return '%s(%d, %d)' % (self.__class__.__name__, |
|
129 |
len(self._sources), self._source_offset) |
|
130 |
||
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
131 |
def __dealloc__(self): |
0.23.43
by John Arbash Meinel
Change the internals to allow delta indexes to be expanded with new source data. |
132 |
if self._index != NULL: |
133 |
free_delta_index(self._index) |
|
134 |
self._index = NULL |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
135 |
safe_free(<void **>&self._source_infos) |
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
136 |
|
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
137 |
def _has_index(self): |
138 |
return (self._index != NULL) |
|
139 |
||
0.23.45
by John Arbash Meinel
Add a function that updates the index for delta bytes. |
140 |
def add_delta_source(self, delta, unadded_bytes): |
141 |
"""Add a new delta to the source texts.
|
|
142 |
||
143 |
:param delta: The text of the delta, this must be a byte string.
|
|
144 |
:param unadded_bytes: Number of bytes that were added to the source
|
|
145 |
that were not indexed.
|
|
146 |
"""
|
|
147 |
cdef char *c_delta |
|
148 |
cdef Py_ssize_t c_delta_size |
|
149 |
cdef delta_index *index |
|
150 |
cdef unsigned int source_location |
|
151 |
cdef source_info *src |
|
152 |
cdef unsigned int num_indexes |
|
153 |
||
154 |
if not PyString_CheckExact(delta): |
|
155 |
raise TypeError('delta is not a str') |
|
156 |
||
157 |
source_location = len(self._sources) |
|
158 |
if source_location >= self._max_num_sources: |
|
159 |
self._expand_sources() |
|
160 |
self._sources.append(delta) |
|
161 |
c_delta = PyString_AS_STRING(delta) |
|
162 |
c_delta_size = PyString_GET_SIZE(delta) |
|
163 |
src = self._source_infos + source_location |
|
164 |
src.buf = c_delta |
|
165 |
src.size = c_delta_size |
|
166 |
src.agg_offset = self._source_offset + unadded_bytes |
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
167 |
with nogil: |
168 |
index = create_delta_index_from_delta(src, self._index) |
|
0.23.45
by John Arbash Meinel
Add a function that updates the index for delta bytes. |
169 |
self._source_offset = src.agg_offset + src.size |
0.23.49
by John Arbash Meinel
When adding new entries to the delta index, use memcpy |
170 |
if index != NULL: |
0.23.45
by John Arbash Meinel
Add a function that updates the index for delta bytes. |
171 |
free_delta_index(self._index) |
172 |
self._index = index |
|
173 |
||
0.23.26
by John Arbash Meinel
We now start to make use of the ability to extend the delta index |
174 |
def add_source(self, source, unadded_bytes): |
175 |
"""Add a new bit of source text to the delta indexes.
|
|
176 |
||
177 |
:param source: The text in question, this must be a byte string
|
|
178 |
:param unadded_bytes: Assume there are this many bytes that didn't get
|
|
179 |
added between this source and the end of the previous source.
|
|
180 |
"""
|
|
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
181 |
cdef char *c_source |
182 |
cdef Py_ssize_t c_source_size |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
183 |
cdef delta_index *index |
0.23.42
by John Arbash Meinel
Change the code around again. |
184 |
cdef unsigned int source_location |
185 |
cdef source_info *src |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
186 |
cdef unsigned int num_indexes |
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
187 |
|
188 |
if not PyString_CheckExact(source): |
|
189 |
raise TypeError('source is not a str') |
|
190 |
||
0.23.42
by John Arbash Meinel
Change the code around again. |
191 |
source_location = len(self._sources) |
192 |
if source_location >= self._max_num_sources: |
|
193 |
self._expand_sources() |
|
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
194 |
if source_location != 0 and self._index == NULL: |
195 |
# We were lazy about populating the index, create it now
|
|
196 |
self._populate_first_index() |
|
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
197 |
self._sources.append(source) |
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
198 |
c_source = PyString_AS_STRING(source) |
199 |
c_source_size = PyString_GET_SIZE(source) |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
200 |
src = self._source_infos + source_location |
201 |
src.buf = c_source |
|
202 |
src.size = c_source_size |
|
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
203 |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
204 |
src.agg_offset = self._source_offset + unadded_bytes |
205 |
self._source_offset = src.agg_offset + src.size |
|
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
206 |
# We delay creating the index on the first insert
|
207 |
if source_location != 0: |
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
208 |
with nogil: |
209 |
index = create_delta_index(src, self._index) |
|
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
210 |
if index != NULL: |
211 |
free_delta_index(self._index) |
|
212 |
self._index = index |
|
213 |
||
214 |
cdef _populate_first_index(self): |
|
215 |
cdef delta_index *index |
|
216 |
if len(self._sources) != 1 or self._index != NULL: |
|
217 |
raise AssertionError('_populate_first_index should only be' |
|
218 |
' called when we have a single source and no index yet') |
|
219 |
||
220 |
# We know that self._index is already NULL, so whatever
|
|
221 |
# create_delta_index returns is fine
|
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
222 |
with nogil: |
223 |
self._index = create_delta_index(&self._source_infos[0], NULL) |
|
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
224 |
assert self._index != NULL |
0.23.25
by John Arbash Meinel
We are now able to add multiple sources to the delta generator. |
225 |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
226 |
cdef _expand_sources(self): |
0.23.43
by John Arbash Meinel
Change the internals to allow delta indexes to be expanded with new source data. |
227 |
raise RuntimeError('if we move self._source_infos, then we need to' |
228 |
' change all of the index pointers as well.') |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
229 |
self._max_num_sources = self._max_num_sources * 2 |
230 |
self._source_infos = <source_info *>safe_realloc(self._source_infos, |
|
231 |
sizeof(source_info) |
|
232 |
* self._max_num_sources) |
|
233 |
||
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
234 |
def make_delta(self, target_bytes, max_delta_size=0): |
235 |
"""Create a delta from the current source to the target bytes."""
|
|
236 |
cdef char *target |
|
237 |
cdef Py_ssize_t target_size |
|
238 |
cdef void * delta |
|
239 |
cdef unsigned long delta_size |
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
240 |
cdef unsigned long c_max_delta_size |
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
241 |
|
0.23.43
by John Arbash Meinel
Change the internals to allow delta indexes to be expanded with new source data. |
242 |
if self._index == NULL: |
4398.6.1
by John Arbash Meinel
Change groupcompress.DeltaIndex to be lazy about indexing the first source. |
243 |
if len(self._sources) == 0: |
244 |
return None |
|
245 |
# We were just lazy about generating the index
|
|
246 |
self._populate_first_index() |
|
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
247 |
|
248 |
if not PyString_CheckExact(target_bytes): |
|
249 |
raise TypeError('target is not a str') |
|
250 |
||
251 |
target = PyString_AS_STRING(target_bytes) |
|
252 |
target_size = PyString_GET_SIZE(target_bytes) |
|
253 |
||
254 |
# TODO: inline some of create_delta so we at least don't have to double
|
|
255 |
# malloc, and can instead use PyString_FromStringAndSize, to
|
|
256 |
# allocate the bytes into the final string
|
|
4788.2.1
by John Arbash Meinel
Wrap the core groupcompress.create_delta calls with 'with nogil' statements. |
257 |
c_max_delta_size = max_delta_size |
258 |
with nogil: |
|
259 |
delta = create_delta(self._index, |
|
260 |
target, target_size, |
|
261 |
&delta_size, c_max_delta_size) |
|
0.23.14
by John Arbash Meinel
Implement a DeltaIndex wrapper. |
262 |
result = None |
263 |
if delta: |
|
264 |
result = PyString_FromStringAndSize(<char *>delta, delta_size) |
|
265 |
free(delta) |
|
266 |
return result |
|
267 |
||
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
268 |
|
269 |
def make_delta(source_bytes, target_bytes): |
|
0.23.42
by John Arbash Meinel
Change the code around again. |
270 |
"""Create a delta, this is a wrapper around DeltaIndex.make_delta."""
|
271 |
di = DeltaIndex(source_bytes) |
|
272 |
return di.make_delta(target_bytes) |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
273 |
|
274 |
||
275 |
def apply_delta(source_bytes, delta_bytes): |
|
276 |
"""Apply a delta generated by make_delta to source_bytes."""
|
|
277 |
cdef char *source |
|
278 |
cdef Py_ssize_t source_size |
|
279 |
cdef char *delta |
|
280 |
cdef Py_ssize_t delta_size |
|
281 |
||
282 |
if not PyString_CheckExact(source_bytes): |
|
283 |
raise TypeError('source is not a str') |
|
284 |
if not PyString_CheckExact(delta_bytes): |
|
285 |
raise TypeError('delta is not a str') |
|
286 |
source = PyString_AS_STRING(source_bytes) |
|
287 |
source_size = PyString_GET_SIZE(source_bytes) |
|
288 |
delta = PyString_AS_STRING(delta_bytes) |
|
289 |
delta_size = PyString_GET_SIZE(delta_bytes) |
|
290 |
# Code taken from patch-delta.c, only brought here to give better error
|
|
291 |
# handling, and to avoid double allocating memory
|
|
292 |
if (delta_size < DELTA_SIZE_MIN): |
|
293 |
# XXX: Invalid delta block
|
|
0.23.33
by John Arbash Meinel
Fix a bug when handling multiple large-range copies. |
294 |
raise RuntimeError('delta_size %d smaller than min delta size %d' |
295 |
% (delta_size, DELTA_SIZE_MIN)) |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
296 |
|
3735.40.19
by John Arbash Meinel
Implement apply_delta_to_source which doesn't have to malloc another string. |
297 |
return _apply_delta(source, source_size, delta, delta_size) |
298 |
||
299 |
||
3735.40.20
by John Arbash Meinel
cleanup the apply_delta code a bit. |
300 |
cdef unsigned char *_decode_copy_instruction(unsigned char *bytes, |
4932.1.1
by John Arbash Meinel
Merge the 2.0 branch, resolve one conflict. |
301 |
unsigned char cmd, unsigned int *offset, |
302 |
unsigned int *length) nogil: # cannot_raise |
|
3735.40.20
by John Arbash Meinel
cleanup the apply_delta code a bit. |
303 |
"""Decode a copy instruction from the next few bytes.
|
304 |
||
305 |
A copy instruction is a variable number of bytes, so we will parse the
|
|
306 |
bytes we care about, and return the new position, as well as the offset and
|
|
307 |
length referred to in the bytes.
|
|
308 |
||
309 |
:param bytes: Pointer to the start of bytes after cmd
|
|
310 |
:param cmd: The command code
|
|
311 |
:return: Pointer to the bytes just after the last decode byte
|
|
312 |
"""
|
|
313 |
cdef unsigned int off, size, count |
|
314 |
off = 0 |
|
315 |
size = 0 |
|
316 |
count = 0 |
|
317 |
if (cmd & 0x01): |
|
318 |
off = bytes[count] |
|
319 |
count = count + 1 |
|
320 |
if (cmd & 0x02): |
|
321 |
off = off | (bytes[count] << 8) |
|
322 |
count = count + 1 |
|
323 |
if (cmd & 0x04): |
|
324 |
off = off | (bytes[count] << 16) |
|
325 |
count = count + 1 |
|
326 |
if (cmd & 0x08): |
|
327 |
off = off | (bytes[count] << 24) |
|
328 |
count = count + 1 |
|
329 |
if (cmd & 0x10): |
|
330 |
size = bytes[count] |
|
331 |
count = count + 1 |
|
332 |
if (cmd & 0x20): |
|
333 |
size = size | (bytes[count] << 8) |
|
334 |
count = count + 1 |
|
335 |
if (cmd & 0x40): |
|
336 |
size = size | (bytes[count] << 16) |
|
337 |
count = count + 1 |
|
338 |
if (size == 0): |
|
339 |
size = 0x10000 |
|
340 |
offset[0] = off |
|
341 |
length[0] = size |
|
342 |
return bytes + count |
|
343 |
||
344 |
||
3735.40.19
by John Arbash Meinel
Implement apply_delta_to_source which doesn't have to malloc another string. |
345 |
cdef object _apply_delta(char *source, Py_ssize_t source_size, |
346 |
char *delta, Py_ssize_t delta_size): |
|
347 |
"""common functionality between apply_delta and apply_delta_to_source."""
|
|
348 |
cdef unsigned char *data, *top |
|
349 |
cdef unsigned char *dst_buf, *out, cmd |
|
350 |
cdef Py_ssize_t size |
|
3735.40.20
by John Arbash Meinel
cleanup the apply_delta code a bit. |
351 |
cdef unsigned int cp_off, cp_size |
4788.2.2
by John Arbash Meinel
Stop holding the gil while extracting data. |
352 |
cdef int failed |
3735.40.19
by John Arbash Meinel
Implement apply_delta_to_source which doesn't have to malloc another string. |
353 |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
354 |
data = <unsigned char *>delta |
355 |
top = data + delta_size |
|
356 |
||
357 |
# now the result size
|
|
358 |
size = get_delta_hdr_size(&data, top) |
|
359 |
result = PyString_FromStringAndSize(NULL, size) |
|
360 |
dst_buf = <unsigned char*>PyString_AS_STRING(result) |
|
361 |
||
4788.2.2
by John Arbash Meinel
Stop holding the gil while extracting data. |
362 |
failed = 0 |
363 |
with nogil: |
|
364 |
out = dst_buf |
|
365 |
while (data < top): |
|
366 |
cmd = data[0] |
|
367 |
data = data + 1 |
|
368 |
if (cmd & 0x80): |
|
369 |
# Copy instruction
|
|
370 |
data = _decode_copy_instruction(data, cmd, &cp_off, &cp_size) |
|
371 |
if (cp_off + cp_size < cp_size or |
|
372 |
cp_off + cp_size > source_size or |
|
373 |
cp_size > size): |
|
374 |
failed = 1 |
|
375 |
break
|
|
376 |
memcpy(out, source + cp_off, cp_size) |
|
377 |
out = out + cp_size |
|
378 |
size = size - cp_size |
|
379 |
else: |
|
380 |
# Insert instruction
|
|
381 |
if cmd == 0: |
|
382 |
# cmd == 0 is reserved for future encoding
|
|
383 |
# extensions. In the mean time we must fail when
|
|
384 |
# encountering them (might be data corruption).
|
|
385 |
failed = 2 |
|
386 |
break
|
|
387 |
if cmd > size: |
|
388 |
failed = 3 |
|
389 |
break
|
|
390 |
memcpy(out, data, cmd) |
|
391 |
out = out + cmd |
|
392 |
data = data + cmd |
|
393 |
size = size - cmd |
|
394 |
if failed: |
|
395 |
if failed == 1: |
|
396 |
raise ValueError('Something wrong with:' |
|
397 |
' cp_off = %s, cp_size = %s' |
|
398 |
' source_size = %s, size = %s' |
|
399 |
% (cp_off, cp_size, source_size, size)) |
|
400 |
elif failed == 2: |
|
401 |
raise ValueError('Got delta opcode: 0, not supported') |
|
402 |
elif failed == 3: |
|
403 |
raise ValueError('Insert instruction longer than remaining' |
|
404 |
' bytes: %d > %d' % (cmd, size)) |
|
0.18.17
by John Arbash Meinel
We now build the appropriate hash table entries. |
405 |
|
3735.40.20
by John Arbash Meinel
cleanup the apply_delta code a bit. |
406 |
# sanity check
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
407 |
if (data != top or size != 0): |
0.23.33
by John Arbash Meinel
Fix a bug when handling multiple large-range copies. |
408 |
raise RuntimeError('Did not extract the number of bytes we expected' |
409 |
' we were left with %d bytes in "size", and top - data = %d' |
|
410 |
% (size, <int>(top - data))) |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
411 |
return None |
412 |
||
413 |
# *dst_size = out - dst_buf;
|
|
3735.40.20
by John Arbash Meinel
cleanup the apply_delta code a bit. |
414 |
if (out - dst_buf) != PyString_GET_SIZE(result): |
415 |
raise RuntimeError('Number of bytes extracted did not match the' |
|
416 |
' size encoded in the delta header.') |
|
0.23.6
by John Arbash Meinel
Start stripping out the actual GroupCompressor |
417 |
return result |
3735.40.16
by John Arbash Meinel
Implement (de|en)code_base128_int in pyrex. |
418 |
|
419 |
||
3735.40.19
by John Arbash Meinel
Implement apply_delta_to_source which doesn't have to malloc another string. |
420 |
def apply_delta_to_source(source, delta_start, delta_end): |
421 |
"""Extract a delta from source bytes, and apply it."""
|
|
422 |
cdef char *c_source |
|
423 |
cdef Py_ssize_t c_source_size |
|
424 |
cdef char *c_delta |
|
425 |
cdef Py_ssize_t c_delta_size |
|
426 |
cdef Py_ssize_t c_delta_start, c_delta_end |
|
427 |
||
428 |
if not PyString_CheckExact(source): |
|
429 |
raise TypeError('source is not a str') |
|
430 |
c_source_size = PyString_GET_SIZE(source) |
|
431 |
c_delta_start = delta_start |
|
432 |
c_delta_end = delta_end |
|
433 |
if c_delta_start >= c_source_size: |
|
434 |
raise ValueError('delta starts after source') |
|
435 |
if c_delta_end > c_source_size: |
|
436 |
raise ValueError('delta ends after source') |
|
437 |
if c_delta_start >= c_delta_end: |
|
438 |
raise ValueError('delta starts after it ends') |
|
439 |
||
440 |
c_delta_size = c_delta_end - c_delta_start |
|
441 |
c_source = PyString_AS_STRING(source) |
|
442 |
c_delta = c_source + c_delta_start |
|
443 |
# We don't use source_size, because we know the delta should not refer to
|
|
444 |
# any bytes after it starts
|
|
445 |
return _apply_delta(c_source, c_delta_start, c_delta, c_delta_size) |
|
446 |
||
447 |
||
3735.40.16
by John Arbash Meinel
Implement (de|en)code_base128_int in pyrex. |
448 |
def encode_base128_int(val): |
449 |
"""Convert an integer into a 7-bit lsb encoding."""
|
|
450 |
cdef unsigned int c_val |
|
451 |
cdef Py_ssize_t count |
|
452 |
cdef unsigned int num_bytes |
|
453 |
cdef unsigned char c_bytes[8] # max size for 32-bit int is 5 bytes |
|
454 |
||
455 |
c_val = val |
|
456 |
count = 0 |
|
457 |
while c_val >= 0x80 and count < 8: |
|
458 |
c_bytes[count] = <unsigned char>((c_val | 0x80) & 0xFF) |
|
459 |
c_val = c_val >> 7 |
|
460 |
count = count + 1 |
|
461 |
if count >= 8 or c_val >= 0x80: |
|
462 |
raise ValueError('encode_base128_int overflowed the buffer') |
|
463 |
c_bytes[count] = <unsigned char>(c_val & 0xFF) |
|
464 |
count = count + 1 |
|
465 |
return PyString_FromStringAndSize(<char *>c_bytes, count) |
|
466 |
||
467 |
||
468 |
def decode_base128_int(bytes): |
|
469 |
"""Decode an integer from a 7-bit lsb encoding."""
|
|
470 |
cdef int offset |
|
471 |
cdef int val |
|
472 |
cdef unsigned int uval |
|
473 |
cdef int shift |
|
474 |
cdef Py_ssize_t num_low_bytes |
|
475 |
cdef unsigned char *c_bytes |
|
476 |
||
477 |
offset = 0 |
|
478 |
val = 0 |
|
479 |
shift = 0 |
|
480 |
if not PyString_CheckExact(bytes): |
|
481 |
raise TypeError('bytes is not a string') |
|
482 |
c_bytes = <unsigned char*>PyString_AS_STRING(bytes) |
|
483 |
# We take off 1, because we have to be able to decode the non-expanded byte
|
|
484 |
num_low_bytes = PyString_GET_SIZE(bytes) - 1 |
|
485 |
while (c_bytes[offset] & 0x80) and offset < num_low_bytes: |
|
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
486 |
val = val | ((c_bytes[offset] & 0x7F) << shift) |
3735.40.16
by John Arbash Meinel
Implement (de|en)code_base128_int in pyrex. |
487 |
shift = shift + 7 |
488 |
offset = offset + 1 |
|
489 |
if c_bytes[offset] & 0x80: |
|
490 |
raise ValueError('Data not properly formatted, we ran out of' |
|
491 |
' bytes before 0x80 stopped being set.') |
|
4241.6.6
by Robert Collins, John Arbash Meinel, Ian Clathworthy, Vincent Ladeuil
Groupcompress from brisbane-core. |
492 |
val = val | (c_bytes[offset] << shift) |
3735.40.16
by John Arbash Meinel
Implement (de|en)code_base128_int in pyrex. |
493 |
offset = offset + 1 |
494 |
if val < 0: |
|
495 |
uval = <unsigned int> val |
|
496 |
return uval, offset |
|
497 |
return val, offset |
|
498 |
||
499 |